0 votes
47 views
ago in Coordination Chemistry by (250 points)
What is the coordination environment of the metal ion in the active site of the enzyme carbonic anhydrase, and how does this coordination affect the enzyme's catalytic activity?

1 Answer

0 votes
ago by (430 points)
Carbonic anhydrase is a metalloenzyme that catalyzes the reversible hydration of carbon dioxide  CO2  to bicarbonate  HCO3-  and a proton  H+ . The metal ion in the active site of carbonic anhydrase is usually zinc  Zn2+ , although some isoforms may contain other metal ions such as cobalt  Co2+  or cadmium  Cd2+ .The coordination environment of the zinc ion in the active site of carbonic anhydrase is tetrahedral. The zinc ion is coordinated to three histidine residues  His  from the protein and a water molecule or hydroxide ion  H2O/OH-  as the fourth ligand. The three histidine residues act as ligands by donating the lone pair of electrons from their imidazole nitrogen atoms to the zinc ion, forming coordinate covalent bonds.The tetrahedral coordination geometry of the zinc ion plays a crucial role in the enzyme's catalytic activity. The zinc ion polarizes the coordinated water molecule, making it more nucleophilic and facilitating the attack on the carbon dioxide molecule. The zinc-bound hydroxide ion acts as a nucleophile, attacking the carbon atom of CO2, leading to the formation of bicarbonate ion. The zinc ion also helps stabilize the negatively charged transition state during the reaction, lowering the activation energy and increasing the reaction rate.Additionally, the coordination environment of the zinc ion is stabilized by other nearby amino acid residues, such as a conserved glutamate residue that forms a hydrogen bond with the zinc-bound water molecule. This further contributes to the enzyme's catalytic activity by maintaining the optimal geometry and electrostatic environment for the reaction to occur.In summary, the coordination environment of the metal ion  usually Zn2+  in the active site of carbonic anhydrase is tetrahedral, with three histidine residues and a water molecule or hydroxide ion as ligands. This coordination geometry plays a crucial role in the enzyme's catalytic activity by facilitating the nucleophilic attack of the zinc-bound hydroxide ion on the carbon dioxide molecule and stabilizing the transition state during the reaction.

Related questions

Welcome to Sarvan Science Q&A, where you can ask questions and receive answers from other members of the community.
...